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Phenotypic and genetic characterization of Piscirickettsia salmonis from Chilean and Canadian salmonids

Overview of attention for article published in BMC Veterinary Research, March 2016
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  • Good Attention Score compared to outputs of the same age (68th percentile)
  • Good Attention Score compared to outputs of the same age and source (72nd percentile)

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Title
Phenotypic and genetic characterization of Piscirickettsia salmonis from Chilean and Canadian salmonids
Published in
BMC Veterinary Research, March 2016
DOI 10.1186/s12917-016-0681-0
Pubmed ID
Authors

Alexander Otterlei, Øyvind J. Brevik, Daniel Jensen, Henrik Duesund, Ingunn Sommerset, Petter Frost, Julio Mendoza, Peter McKenzie, Are Nylund, Patricia Apablaza

Abstract

The study presents the phenotypic and genetic characterization of selected P. salmonis isolates from Atlantic salmon and rainbow trout suffering from SRS (salmonid rickettsial septicemia) in Chile and in Canada. The phenotypic characterization of the P. salmonis isolates were based on growth on different agar media (including a newly developed medium), different growth temperatures, antibiotics susceptibility and biochemical tests. This is the first study differentiating Chilean P. salmonis isolates into two separate genetic groups. Genotyping, based on 16S rRNA-ITS and concatenated housekeeping genes grouped the selected isolates into two clades, constituted by the Chilean strains, while the Canadian isolates form a branch in the phylogenetic tree. The latter consisted of two isolates that were different in both genetic and phenotypic characteristics. The phylogenies and the MLST do not reflect the origin of the isolates with respect to host species. The isolates included were heterogeneous in phenotypic tests. The genotyping methods developed in this study provided a tool for separation of P. salmonis isolates into distinct clades. The SRS outbreaks in Chile are caused by minimum two different genetic groups of P. salmonis. This heterogeneity should be considered in future development of vaccines against this bacterium in Chile. Two different strains of P. salmonis, in regards to genetic and phenotypic characteristics, can occur in the same contemporary outbreak of SRS.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 74 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Chile 2 3%
Unknown 72 97%

Demographic breakdown

Readers by professional status Count As %
Researcher 19 26%
Student > Bachelor 11 15%
Student > Ph. D. Student 10 14%
Student > Doctoral Student 7 9%
Student > Master 6 8%
Other 9 12%
Unknown 12 16%
Readers by discipline Count As %
Agricultural and Biological Sciences 24 32%
Biochemistry, Genetics and Molecular Biology 12 16%
Veterinary Science and Veterinary Medicine 9 12%
Immunology and Microbiology 3 4%
Environmental Science 2 3%
Other 7 9%
Unknown 17 23%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 18 December 2019.
All research outputs
#7,216,061
of 25,013,816 outputs
Outputs from BMC Veterinary Research
#516
of 3,258 outputs
Outputs of similar age
#94,516
of 305,581 outputs
Outputs of similar age from BMC Veterinary Research
#10
of 33 outputs
Altmetric has tracked 25,013,816 research outputs across all sources so far. This one has received more attention than most of these and is in the 69th percentile.
So far Altmetric has tracked 3,258 research outputs from this source. They receive a mean Attention Score of 4.2. This one has done well, scoring higher than 83% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 305,581 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 68% of its contemporaries.
We're also able to compare this research output to 33 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 72% of its contemporaries.