RT @sokrypton: @Ag_smith Minor correction our parallel implementation is actually called "anti-diagonal" (we misnamed it in MS). This is w…
1,995 followers
12,145 followers
@Ag_smith Minor correction our parallel implementation is actually called "anti-diagonal" (we misnamed it in MS). This is what happens when you implement an idea, then try to use google-images to figure out if someone did it before and what they called it
12,145 followers
@jakevdp Oops! Thanks to @thesteinegger for pointing out we had actually implemented an "anti-diagonal" not a "striped" vectorization of smith-waterman. First described by Wozniak et al. Using video-oriented instructions to speed up sequence comparison.
6,029 followers
RT @mkasahara: Intersequence parallelization で速くするアイディアは10年前に既出 https://t.co/pYEBvLE9wh だし、これを minimap2 に実装すると、1リードあたりで使える CPU cache 容量が激減す…