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PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text

Overview of attention for article published in BMC Bioinformatics, April 2012
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Title
PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text
Published in
BMC Bioinformatics, April 2012
DOI 10.1186/1471-2105-13-s5-s2
Pubmed ID
Authors

Yuri Pirola, Raffaella Rizzi, Ernesto Picardi, Graziano Pesole, Gianluca Della Vedova, Paola Bonizzoni

Abstract

A challenging issue in designing computational methods for predicting the gene structure into exons and introns from a cluster of transcript (EST, mRNA) sequences, is guaranteeing accuracy as well as efficiency in time and space, when large clusters of more than 20,000 ESTs and genes longer than 1 Mb are processed. Traditionally, the problem has been faced by combining different tools, not specifically designed for this task.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 23 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 9%
Italy 1 4%
Unknown 20 87%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 4 17%
Researcher 4 17%
Professor 4 17%
Student > Bachelor 2 9%
Student > Postgraduate 2 9%
Other 5 22%
Unknown 2 9%
Readers by discipline Count As %
Agricultural and Biological Sciences 8 35%
Biochemistry, Genetics and Molecular Biology 6 26%
Computer Science 4 17%
Neuroscience 1 4%
Engineering 1 4%
Other 0 0%
Unknown 3 13%