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Exploration of multivariate analysis in microbial coding sequence modeling

Overview of attention for article published in BMC Bioinformatics, May 2012
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Title
Exploration of multivariate analysis in microbial coding sequence modeling
Published in
BMC Bioinformatics, May 2012
DOI 10.1186/1471-2105-13-97
Pubmed ID
Authors

Tahir Mehmood, Jon Bohlin, Anja Bråthen Kristoffersen, Solve Sæbø, Jonas Warringer, Lars Snipen

Abstract

Gene finding is a complicated procedure that encapsulates algorithms for coding sequence modeling, identification of promoter regions, issues concerning overlapping genes and more. In the present study we focus on coding sequence modeling algorithms; that is, algorithms for identification and prediction of the actual coding sequences from genomic DNA. In this respect, we promote a novel multivariate method known as Canonical Powered Partial Least Squares (CPPLS) as an alternative to the commonly used Interpolated Markov model (IMM). Comparisons between the methods were performed on DNA, codon and protein sequences with highly conserved genes taken from several species with different genomic properties.

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The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 17 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Mexico 1 6%
United States 1 6%
Norway 1 6%
Unknown 14 82%

Demographic breakdown

Readers by professional status Count As %
Researcher 8 47%
Professor > Associate Professor 2 12%
Professor 2 12%
Student > Ph. D. Student 2 12%
Other 1 6%
Other 1 6%
Unknown 1 6%
Readers by discipline Count As %
Agricultural and Biological Sciences 9 53%
Computer Science 2 12%
Engineering 2 12%
Medicine and Dentistry 1 6%
Economics, Econometrics and Finance 1 6%
Other 0 0%
Unknown 2 12%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 15 May 2012.
All research outputs
#20,157,329
of 22,665,794 outputs
Outputs from BMC Bioinformatics
#6,819
of 7,247 outputs
Outputs of similar age
#148,521
of 163,891 outputs
Outputs of similar age from BMC Bioinformatics
#98
of 103 outputs
Altmetric has tracked 22,665,794 research outputs across all sources so far. This one is in the 1st percentile – i.e., 1% of other outputs scored the same or lower than it.
So far Altmetric has tracked 7,247 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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We're also able to compare this research output to 103 others from the same source and published within six weeks on either side of this one. This one is in the 1st percentile – i.e., 1% of its contemporaries scored the same or lower than it.