@LarryMattYork In https://t.co/Aqkxonej9E we found tuning the parameters of the baseline comparison method (Frangi vesselness filter) non-intuitive so used a genetic algorithm to search for the optimal hyper-parameters on our dataset. Unfortunately this wa
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@LarryMattYork I agree. It’s important to work closely with the right domain experts. My first root analysis software (https://t.co/DhGWjEK6hh) solved a problem, but like many similar systems, is often not user-friendly enough in practice.
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@LarryMattYork And this work in Journal of Plant methods, which was precursor to Rootpainter might also be relevant. https://t.co/Rg5LXWHFAP
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RT @PlantMethods: Segmentation of roots in soil with U-Net https://t.co/uHTb3KmEEs