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Complete genome sequence of the potato pathogen Ralstonia solanacearum UY031

Overview of attention for article published in Environmental Microbiome, January 2016
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  • High Attention Score compared to outputs of the same age and source (80th percentile)

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1 X user
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3 Wikipedia pages

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26 Dimensions

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114 Mendeley
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Title
Complete genome sequence of the potato pathogen Ralstonia solanacearum UY031
Published in
Environmental Microbiome, January 2016
DOI 10.1186/s40793-016-0131-4
Pubmed ID
Authors

Rodrigo Guarischi-Sousa, Marina Puigvert, Núria S. Coll, María Inés Siri, María Julia Pianzzola, Marc Valls, João C. Setubal

Abstract

Ralstonia solanacearum is the causative agent of bacterial wilt of potato. Ralstonia solanacearum strain UY031 belongs to the American phylotype IIB, sequevar 1, also classified as race 3 biovar 2. Here we report the completely sequenced genome of this strain, the first complete genome for phylotype IIB, sequevar 1, and the fourth for the R. solanacearum species complex. In addition to standard genome annotation, we have carried out a curated annotation of type III effector genes, an important pathogenicity-related class of genes for this organism. We identified 60 effector genes, and observed that this effector repertoire is distinct when compared to those from other phylotype IIB strains. Eleven of the effectors appear to be nonfunctional due to disruptive mutations. We also report a methylome analysis of this genome, the first for a R. solanacearum strain. This analysis helped us note the presence of a toxin gene within a region of probable phage origin, raising the hypothesis that this gene may play a role in this strain's virulence.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 114 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 1 <1%
Unknown 113 99%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 24 21%
Student > Master 20 18%
Student > Bachelor 11 10%
Researcher 6 5%
Student > Doctoral Student 4 4%
Other 14 12%
Unknown 35 31%
Readers by discipline Count As %
Agricultural and Biological Sciences 50 44%
Biochemistry, Genetics and Molecular Biology 17 15%
Environmental Science 3 3%
Immunology and Microbiology 2 2%
Computer Science 2 2%
Other 5 4%
Unknown 35 31%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 07 March 2022.
All research outputs
#7,356,343
of 25,374,647 outputs
Outputs from Environmental Microbiome
#205
of 786 outputs
Outputs of similar age
#109,359
of 402,280 outputs
Outputs of similar age from Environmental Microbiome
#4
of 21 outputs
Altmetric has tracked 25,374,647 research outputs across all sources so far. This one has received more attention than most of these and is in the 69th percentile.
So far Altmetric has tracked 786 research outputs from this source. They receive a mean Attention Score of 4.8. This one has gotten more attention than average, scoring higher than 72% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 402,280 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 71% of its contemporaries.
We're also able to compare this research output to 21 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 80% of its contemporaries.