↓ Skip to main content

Complete genome sequence of the potato pathogen Ralstonia solanacearum UY031

Overview of attention for article published in Standards in Genomic Sciences, January 2016
Altmetric Badge

About this Attention Score

  • Above-average Attention Score compared to outputs of the same age (64th percentile)

Mentioned by

twitter
1 tweeter
wikipedia
3 Wikipedia pages

Citations

dimensions_citation
25 Dimensions

Readers on

mendeley
107 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Title
Complete genome sequence of the potato pathogen Ralstonia solanacearum UY031
Published in
Standards in Genomic Sciences, January 2016
DOI 10.1186/s40793-016-0131-4
Pubmed ID
Authors

Rodrigo Guarischi-Sousa, Marina Puigvert, Núria S. Coll, María Inés Siri, María Julia Pianzzola, Marc Valls, João C. Setubal

Abstract

Ralstonia solanacearum is the causative agent of bacterial wilt of potato. Ralstonia solanacearum strain UY031 belongs to the American phylotype IIB, sequevar 1, also classified as race 3 biovar 2. Here we report the completely sequenced genome of this strain, the first complete genome for phylotype IIB, sequevar 1, and the fourth for the R. solanacearum species complex. In addition to standard genome annotation, we have carried out a curated annotation of type III effector genes, an important pathogenicity-related class of genes for this organism. We identified 60 effector genes, and observed that this effector repertoire is distinct when compared to those from other phylotype IIB strains. Eleven of the effectors appear to be nonfunctional due to disruptive mutations. We also report a methylome analysis of this genome, the first for a R. solanacearum strain. This analysis helped us note the presence of a toxin gene within a region of probable phage origin, raising the hypothesis that this gene may play a role in this strain's virulence.

Twitter Demographics

The data shown below were collected from the profile of 1 tweeter who shared this research output. Click here to find out more about how the information was compiled.

Mendeley readers

The data shown below were compiled from readership statistics for 107 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 1 <1%
Unknown 106 99%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 22 21%
Student > Master 21 20%
Student > Bachelor 9 8%
Researcher 6 6%
Student > Postgraduate 4 4%
Other 15 14%
Unknown 30 28%
Readers by discipline Count As %
Agricultural and Biological Sciences 46 43%
Biochemistry, Genetics and Molecular Biology 16 15%
Environmental Science 3 3%
Chemistry 3 3%
Engineering 2 2%
Other 6 6%
Unknown 31 29%

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 07 March 2022.
All research outputs
#6,908,994
of 21,944,731 outputs
Outputs from Standards in Genomic Sciences
#111
of 564 outputs
Outputs of similar age
#96,470
of 282,765 outputs
Outputs of similar age from Standards in Genomic Sciences
#1
of 1 outputs
Altmetric has tracked 21,944,731 research outputs across all sources so far. This one has received more attention than most of these and is in the 67th percentile.
So far Altmetric has tracked 564 research outputs from this source. They receive a mean Attention Score of 2.7. This one has gotten more attention than average, scoring higher than 73% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 282,765 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 64% of its contemporaries.
We're also able to compare this research output to 1 others from the same source and published within six weeks on either side of this one. This one has scored higher than all of them