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CytoITMprobe: a network information flow plugin for Cytoscape

Overview of attention for article published in BMC Research Notes, May 2012
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Mentioned by

twitter
2 X users

Citations

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6 Dimensions

Readers on

mendeley
22 Mendeley
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1 CiteULike
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Title
CytoITMprobe: a network information flow plugin for Cytoscape
Published in
BMC Research Notes, May 2012
DOI 10.1186/1756-0500-5-237
Pubmed ID
Authors

Aleksandar Stojmirović, Alexander Bliskovsky, Yi-Kuo Yu

Abstract

Cytoscape is a well-developed flexible platform for visualization, integration and analysis of network data. Apart from the sophisticated graph layout and visualization routines, it hosts numerous user-developed plugins that significantly extend its core functionality. Earlier, we developed a network information flow framework and implemented it as a web application, called ITM Probe. Given a context consisting of one or more user-selected nodes, ITM Probe retrieves other network nodes most related to that context. It requires neither user restriction to subnetwork of interest nor additional and possibly noisy information. However, plugins for Cytoscape with these features do not yet exist. To provide the Cytoscape users the possibility of integrating ITM Probe into their workflows, we developed CytoITMprobe, a new Cytoscape plugin.

X Demographics

X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 22 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Hungary 2 9%
United States 2 9%
Italy 1 5%
Unknown 17 77%

Demographic breakdown

Readers by professional status Count As %
Researcher 5 23%
Student > Ph. D. Student 5 23%
Other 3 14%
Student > Bachelor 2 9%
Professor > Associate Professor 2 9%
Other 2 9%
Unknown 3 14%
Readers by discipline Count As %
Agricultural and Biological Sciences 10 45%
Biochemistry, Genetics and Molecular Biology 5 23%
Computer Science 2 9%
Medicine and Dentistry 1 5%
Unknown 4 18%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 31 July 2012.
All research outputs
#14,148,857
of 22,673,450 outputs
Outputs from BMC Research Notes
#1,946
of 4,249 outputs
Outputs of similar age
#96,172
of 163,712 outputs
Outputs of similar age from BMC Research Notes
#34
of 65 outputs
Altmetric has tracked 22,673,450 research outputs across all sources so far. This one is in the 35th percentile – i.e., 35% of other outputs scored the same or lower than it.
So far Altmetric has tracked 4,249 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.5. This one has gotten more attention than average, scoring higher than 50% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 163,712 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 38th percentile – i.e., 38% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 65 others from the same source and published within six weeks on either side of this one. This one is in the 44th percentile – i.e., 44% of its contemporaries scored the same or lower than it.