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Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments

Overview of attention for article published in Source Code for Biology and Medicine, May 2012
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • Among the highest-scoring outputs from this source (#30 of 127)
  • Good Attention Score compared to outputs of the same age (77th percentile)

Mentioned by

twitter
4 X users
wikipedia
1 Wikipedia page

Readers on

mendeley
63 Mendeley
citeulike
1 CiteULike
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Title
Bio-samtools: Ruby bindings for SAMtools, a library for accessing BAM files containing high-throughput sequence alignments
Published in
Source Code for Biology and Medicine, May 2012
DOI 10.1186/1751-0473-7-6
Pubmed ID
Authors

Ricardo H Ramirez-Gonzalez, Raoul Bonnal, Mario Caccamo, Daniel MacLean

Abstract

The SAMtools utilities comprise a very useful and widely used suite of software for manipulating files and alignments in the SAM and BAM format, used in a wide range of genetic analyses. The SAMtools utilities are implemented in C and provide an API for programmatic access, to help make this functionality available to programmers wishing to develop in the high level Ruby language we have developed bio-samtools, a Ruby binding to the SAMtools library.

X Demographics

X Demographics

The data shown below were collected from the profiles of 4 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 63 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Japan 2 3%
Malaysia 1 2%
Belgium 1 2%
Brazil 1 2%
Unknown 58 92%

Demographic breakdown

Readers by professional status Count As %
Researcher 16 25%
Student > Ph. D. Student 11 17%
Student > Master 9 14%
Student > Bachelor 7 11%
Student > Doctoral Student 2 3%
Other 7 11%
Unknown 11 17%
Readers by discipline Count As %
Agricultural and Biological Sciences 23 37%
Biochemistry, Genetics and Molecular Biology 17 27%
Computer Science 4 6%
Medicine and Dentistry 2 3%
Veterinary Science and Veterinary Medicine 1 2%
Other 4 6%
Unknown 12 19%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 6. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 05 May 2019.
All research outputs
#4,668,471
of 22,673,450 outputs
Outputs from Source Code for Biology and Medicine
#30
of 127 outputs
Outputs of similar age
#32,675
of 165,048 outputs
Outputs of similar age from Source Code for Biology and Medicine
#5
of 6 outputs
Altmetric has tracked 22,673,450 research outputs across all sources so far. Compared to these this one has done well and is in the 76th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 127 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 8.0. This one has done well, scoring higher than 75% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 165,048 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 77% of its contemporaries.
We're also able to compare this research output to 6 others from the same source and published within six weeks on either side of this one.