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Normalization of ChIP-seq data with control

Overview of attention for article published in BMC Bioinformatics, August 2012
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (80th percentile)
  • High Attention Score compared to outputs of the same age and source (81st percentile)

Mentioned by

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6 X users
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1 patent

Citations

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102 Dimensions

Readers on

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277 Mendeley
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6 CiteULike
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Title
Normalization of ChIP-seq data with control
Published in
BMC Bioinformatics, August 2012
DOI 10.1186/1471-2105-13-199
Pubmed ID
Authors

Kun Liang, Sündüz Keleş

Abstract

ChIP-seq has become an important tool for identifying genome-wide protein-DNA interactions, including transcription factor binding and histone modifications. In ChIP-seq experiments, ChIP samples are usually coupled with their matching control samples. Proper normalization between the ChIP and control samples is an essential aspect of ChIP-seq data analysis.

X Demographics

X Demographics

The data shown below were collected from the profiles of 6 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 277 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 7 3%
Germany 3 1%
United Kingdom 3 1%
Sweden 2 <1%
Indonesia 1 <1%
Australia 1 <1%
Finland 1 <1%
France 1 <1%
Mexico 1 <1%
Other 3 1%
Unknown 254 92%

Demographic breakdown

Readers by professional status Count As %
Researcher 83 30%
Student > Ph. D. Student 74 27%
Student > Master 21 8%
Student > Bachelor 19 7%
Professor > Associate Professor 16 6%
Other 38 14%
Unknown 26 9%
Readers by discipline Count As %
Agricultural and Biological Sciences 138 50%
Biochemistry, Genetics and Molecular Biology 66 24%
Computer Science 17 6%
Mathematics 7 3%
Immunology and Microbiology 5 2%
Other 13 5%
Unknown 31 11%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 7. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 09 June 2022.
All research outputs
#4,630,994
of 22,673,450 outputs
Outputs from BMC Bioinformatics
#1,793
of 7,249 outputs
Outputs of similar age
#33,007
of 167,363 outputs
Outputs of similar age from BMC Bioinformatics
#19
of 100 outputs
Altmetric has tracked 22,673,450 research outputs across all sources so far. Compared to these this one has done well and is in the 79th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 7,249 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one has done well, scoring higher than 75% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 167,363 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 80% of its contemporaries.
We're also able to compare this research output to 100 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 81% of its contemporaries.