Title |
Systematic and searchable classification of cytochrome P450 proteins encoded by fungal and oomycete genomes
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Published in |
BMC Genomics, October 2012
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DOI | 10.1186/1471-2164-13-525 |
Pubmed ID | |
Authors |
Venkatesh Moktali, Jongsun Park, Natalie D Fedorova-Abrams, Bongsoo Park, Jaeyoung Choi, Yong-Hwan Lee, Seogchan Kang |
Abstract |
Cytochrome P450 proteins (CYPs) play diverse and pivotal roles in fungal metabolism and adaptation to specific ecological niches. Fungal genomes encode extremely variable "CYPomes" ranging from one to more than 300 CYPs. Despite the rapid growth of sequenced fungal and oomycete genomes and the resulting influx of predicted CYPs, the vast majority of CYPs remain functionally uncharacterized. To facilitate the curation and functional and evolutionary studies of CYPs, we previously developed Fungal Cytochrome P450 Database (FCPD), which included CYPs from 70 fungal and oomycete species. Here we present a new version of FCPD (1.2) with more data and an improved classification scheme. |
X Demographics
Geographical breakdown
Country | Count | As % |
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United States | 2 | 40% |
France | 1 | 20% |
Unknown | 2 | 40% |
Demographic breakdown
Type | Count | As % |
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Members of the public | 4 | 80% |
Scientists | 1 | 20% |
Mendeley readers
Geographical breakdown
Country | Count | As % |
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United States | 3 | 2% |
Finland | 1 | <1% |
Mexico | 1 | <1% |
India | 1 | <1% |
Unknown | 129 | 96% |
Demographic breakdown
Readers by professional status | Count | As % |
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Researcher | 29 | 21% |
Student > Ph. D. Student | 23 | 17% |
Student > Master | 23 | 17% |
Student > Bachelor | 10 | 7% |
Student > Doctoral Student | 7 | 5% |
Other | 26 | 19% |
Unknown | 17 | 13% |
Readers by discipline | Count | As % |
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Agricultural and Biological Sciences | 59 | 44% |
Biochemistry, Genetics and Molecular Biology | 33 | 24% |
Environmental Science | 4 | 3% |
Pharmacology, Toxicology and Pharmaceutical Science | 3 | 2% |
Computer Science | 3 | 2% |
Other | 10 | 7% |
Unknown | 23 | 17% |