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Identification of cis-regulatory sequence variations in individual genome sequences

Overview of attention for article published in Genome Medicine, October 2011
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (87th percentile)
  • Above-average Attention Score compared to outputs of the same age and source (58th percentile)

Mentioned by

blogs
1 blog
twitter
2 X users

Citations

dimensions_citation
17 Dimensions

Readers on

mendeley
77 Mendeley
citeulike
3 CiteULike
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Title
Identification of cis-regulatory sequence variations in individual genome sequences
Published in
Genome Medicine, October 2011
DOI 10.1186/gm281
Pubmed ID
Authors

Rebecca Worsley-Hunt, Virginie Bernard, Wyeth W Wasserman

Abstract

Functional contributions of cis-regulatory sequence variations to human genetic disease are numerous. For instance, disrupting variations in a HNF4A transcription factor binding site upstream of the Factor IX gene contributes causally to hemophilia B Leyden. Although clinical genome sequence analysis currently focuses on the identification of protein-altering variation, the impact of cis-regulatory mutations can be similarly strong. New technologies are now enabling genome sequencing beyond exomes, revealing variation across the non-coding 98% of the genome responsible for developmental and physiological patterns of gene activity. The capacity to identify causal regulatory mutations is improving, but predicting functional changes in regulatory DNA sequences remains a great challenge. Here we explore the existing methods and software for prediction of functional variation situated in the cis-regulatory sequences governing gene transcription and RNA processing.

X Demographics

X Demographics

The data shown below were collected from the profiles of 2 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 77 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Spain 1 1%
Unknown 76 99%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 22 29%
Researcher 12 16%
Student > Master 10 13%
Student > Bachelor 8 10%
Student > Doctoral Student 5 6%
Other 9 12%
Unknown 11 14%
Readers by discipline Count As %
Agricultural and Biological Sciences 27 35%
Biochemistry, Genetics and Molecular Biology 17 22%
Computer Science 5 6%
Neuroscience 4 5%
Engineering 3 4%
Other 7 9%
Unknown 14 18%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 10. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 31 December 2016.
All research outputs
#3,608,734
of 25,374,647 outputs
Outputs from Genome Medicine
#778
of 1,585 outputs
Outputs of similar age
#19,263
of 148,551 outputs
Outputs of similar age from Genome Medicine
#7
of 17 outputs
Altmetric has tracked 25,374,647 research outputs across all sources so far. Compared to these this one has done well and is in the 85th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 1,585 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 26.8. This one has gotten more attention than average, scoring higher than 50% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 148,551 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 87% of its contemporaries.
We're also able to compare this research output to 17 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 58% of its contemporaries.